Assessing Adaptation Of A Lentil (Lens culinaris Medik.) Diversity Panel To Temperature And Photoperiod

Contact:

Derek Wright, Sandesh Neupane, Taryn Heidecker, Teketel Haile, Clarice Coyne, Sripada Udupa, Eleonora Barilli, Diego Rubiales, Tania Gioia, Reena Mehra, Ashutosh Sarker, Rajeev Dhakal, Babul Anwar, Debashish Sarker, Albert Vandenberg, and Kirstin E. Bett

View as HTML

Introduction

Project Collaborators:

  • Department of Plant Sciences and Crop Development Centre, University of Saskatchewan, Saskatoon, Saskatchewan, Canada
  • United States Department of Agriculture Western Region Plant Introduction Station, Pullman, Washington, USA
  • International Center for Agriculture Research in the Dry Areas, Rabat, Morocco
  • Institute for Sustainable Agriculture, Spanish National Research Council, Cordoba, Spain
  • School of Agriculture, Forestry, Food and Environmental Sciences, University of Basilicata, Potenza, Italy
  • International Center for Agriculture Research in the Dry Areas, New Delhi, India
  • Local Initiatives for Biodiversity, Research and Development, Pokhara, Nepal
  • Bangladesh Agricultural Research Institute, Jessore, Bangladesh

Project Sponsors:

  • Saskatchewan Pulse Growers Association
  • Western Grains Research Foundation
  • GenomePrairie
  • GenomeCanada
  • Saskatchewan Ministry of Agriculture

Shiny App

Download this folder and run app.R in R

Figures

Figure 1

Figure 2

Figure 3

Figure 4

Figure 5

Figure 6

Figure 7

Supplemental Figures

Supplemental Figure 1

Supplemental Figure 2

Supplemental Figure 3

Supplemental Figure 4

Supplemental Figure 5

Supplemental Figure 6

Supplemental Figure 7

Supplemental Figure 8

Supplemental Figure 9

Supplemental Figure 10

Supplemental Figure 11

Supplemental Tables

Supplemental Table 1

Entry Name Origin Source Synonyms
1 1 CDC Asterix AGL Canada USASK
2 2 CDC Rosie AGL Canada USASK
3 3 3156-11 AGL Canada USASK
4 4 CDC Greenstar AGL Canada USASK
5 5 CDC Cherie AGL Canada USASK
31 31 CN 105777 AGL Egypt PGRC LENS 170;B 47
32 32 CN 105789 AGL Ethiopia PGRC LENS 184;B 136
33 33 CN 105791 AGL Egypt PGRC LENS 190;B 32
34 34 CN 105862 AGL Tunisia PGRC LENS 559
35 35 CN 105863 AGL Tunisia PGRC LENS 561
101 101 ILL 6821 AGL Ethiopia ICARDA IG 73685;FLIP 89-63L;ALEMAYA
102 102 ILL 6853 AGL Syria ICARDA IG 73717
103 103 ILL 7089 AGL Russia ICARDA IG 73953
104 104 ILL 7558 AGL India ICARDA IG 76277
105 105 ILL 7663 AGL ICARDA ICARDA IG 114665;FLIP 95-7L
320 320 W6 27754 LSP AGL USDA USDA
321 321 W6 27760 LSP AGL USDA USDA
322 322 W6 27763 LSP AGL USDA USDA
323 323 W6 27766 LSP AGL USDA USDA
324 324 W6 27767 LSP AGL USDA USDA

Supplemental Table 2

Location Year Short.Name Planting.Date Latitude Longitude Temperature..mean. Photoperiod..mean. Number.of.Seeds.Sown Plot.Type
Sutherland, Canada 2016 Su16 2016-04-27 52.16770 -106.5054 16.7 15.9 60 three, 1 meter rows
Rosthern, Canada 2016 Ro16 2016-05-06 52.68920 -106.2945 17.2 16.2 60 three, 1 meter rows
Marchouch, Morocco 2016 Mo16 2016-11-21 33.62000 -6.7200 12.0 10.8 25 one, 1 meter row
Cordoba, Spain 2016 Sp16 2016-12-13 37.90000 -4.8000 12.5 10.9 25 one, 1 meter row
Metaponto, Italy 2016 It16 2016-11-29 40.39000 16.7800 10.6 10.8 25 one, 1 meter row
Bhopal, India 2016 In16 2016-12-04 23.11000 76.8800 17.6 10.9 25 one, 1 meter row
Bardiya, Nepal 2016 Ne16 2016-11-14 28.25000 81.5000 19.2 11.0 25 one, 1 meter row
Jessore, Bangladesh 2016 Ba16 2016-11-15 23.19000 89.1900 18.6 10.8 25 one, 1 meter row
Sutherland, Canada 2017 Su17 2017-05-04 52.16832 -106.5108 15.7 16.1 70 three, 1 meter rows
Rosthern, Canada 2017 Ro17 2017-05-19 52.69150 -106.2897 17.5 16.4 70 three, 1 meter rows
Marchouch, Morocco 2017 Mo17 2017-12-21 33.62000 -6.7200 11.8 11.5 50 two, 1 meter rows
Cordoba, Spain 2017 Sp17 2017-12-14 37.90000 -4.8000 11.7 11.1 50 two, 1 meter rows
Metaponto, Italy 2017 It17 2017-11-28 40.39000 16.7800 11.2 10.8 50 two, 1 meter rows
Bhopal, India 2017 In17 2017-11-09 23.11500 76.8850 20.6 10.7 50 two, 1 meter rows
Jessore, Bangladesh 2017 Ba17 2017-12-03 23.19500 89.1950 21.7 11.0 50 two, 1 meter rows
Central Ferry, USA 2018 Us18 2018-03-29 46.65000 -117.7600 15.8 14.3 50 two, 1 meter rows
Sutherland, Canada 2018 Su18 2018-05-09 52.16890 -106.5149 17.6 16.1 70 three, 1 meter rows
Bardiya, Nepal 2017 Ne17 2017-11-03 28.42000 81.8600 19.4 10.8 50 two, 1 meter rows

Supplemental Table 3

Entry Name a b c d RR Environments a_p.value b_p.value c_p.value d_p.value
1 1 CDC Asterix AGL -0.0187717 0.0003372 0.0020456 NA 0.8978347 16 0.0000000 0.0000001 0.0000000 NA
2 1 CDC Asterix AGL 0.0072693 -0.0012017 -0.0003174 0.0001397 0.8992827 16 0.6202032 0.1688352 0.8110850 0.0793975
61 31 CN 105777 AGL -0.0203402 0.0006260 0.0020791 NA 0.8417776 18 0.0000000 0.0000000 0.0000000 NA
62 31 CN 105777 AGL -0.0299805 0.0011958 0.0029539 -0.0000518 0.8473458 18 0.1417083 0.3178702 0.1107758 0.6321050
201 101 ILL 6821 AGL -0.0207765 0.0001801 0.0024844 NA 0.9055885 14 0.0000000 0.0006591 0.0000000 NA
202 101 ILL 6821 AGL -0.0149886 -0.0001621 0.0019592 0.0000311 0.9051060 14 0.2937562 0.8467141 0.1321410 0.6828037
647 324 W6 27767 LSP AGL -0.0194010 0.0002353 0.0022805 NA 0.8697454 15 0.0000000 0.0000289 0.0000000 NA
648 324 W6 27767 LSP AGL -0.0080395 -0.0004354 0.0012494 0.0000609 0.8679062 15 0.5871621 0.6178443 0.3531932 0.4421900

Supplemental Table 4

Temperate_Location SouthAsian_Location Mediterranean_Location RR Genotypes
1 Ro17 In16 Sp16 0.461770 159
2 Su18 In16 Sp16 0.462242 159
3 Ro16 In16 Sp16 0.466809 159
4 Su17 In16 Sp16 0.469932 159
5 Su16 In16 Sp16 0.473691 159
6 Ro17 In16 It17 0.475920 159
211 Ro17 Ba17 Sp17 0.858843 291
212 Su16 Ba17 Mo16 0.858923 291
213 Ro16 Ba17 Sp17 0.859936 291
214 Us18 Ba17 Sp17 0.861168 289
215 Su17 Ba17 Sp17 0.862977 291
216 Su16 Ba17 Sp17 0.863054 291

Animations

Additional Figures

Additional Figure 1

Additional Figure 2

Additional Figure 3

Additional Figure 4

Additional Figure 6

Additional Figure 7

Additional Figure 8

Additional Figure 9

Additional Figure 10

Additional Figure 11

Additional Figure 12

Additional Figure 13

Additional Figure 14

Derek Michael Wright

2020-01-02